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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886493.1_cds_XP_016440624.1_36063
CDS Infomation

[gene=LOC107766366] [db_xref=GeneID:107766366] [protein=deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog] [protein_id=XP_016440624.1] [location=join(5658..5777,7010..7047,7131..7153,8134..8240,8327..8378,8454..8538,9945..10035,11023..11058,11163..11230,11318..11380,11488..11543,11636..11709,11825..11917,12000..12101,12378..12458,12539..12627,12726..12741,13285..13395,13580..13684)] [gbkey=CDS]
Sequence

ATGGGAAATTGTAACAACGATGACTTCTGGACCTACACCTCCGCTACATCTTTCGTTGAT
GATCGTCGATTCTCCAAACACGTTCATGACAATGTCCACGGCAACATCTATCTCGATCGT
CTATCTCTGAAGTTCATCGACACCGAACAATTTCAGAGGCTTCGCGATTTGAAGCAGCTA
GGTCTTACATACATGGTCTACCCTGGGGCTGTGCACTCTCGATTTGAGCATTCCCTAGGG
GTCTATTGGCTGGCCAGTGATGCTGTAAACAGACTTAAGACCTGTCAAGGAGTGGAGCTT
GGCATTGAATCTTTTGACGTACAGACTGTGAAACTTGCTGGATTACTACATGATGTGGGT
CACGGGCCATTCAGTCACATGTTTGAGCGTGAATTTCTTCCTCGGGTTCGTGACGGCCTT
AAGTGGTCCCACGAAGATATGTCTTTGAAGATGATAGACTACATTGTTGATGAGCATGGC
ATTGATATTGGTTCTGACTGTCTGAAGAAAGTGAAGGAACTGATAGTTGCTTCTGAGGAA
GGTAATTCAGTGAGCTCGAAGGAGAAGCAGTTCTTGTATGACATTGTTGCTAATGGGCGA
AATGGAATAGATGTTGACAAATTTGATTACATAGAGCGTGACACCAGAGCTTGTGGTCTT
GGGTGCAATTTTCAGTTCCAGAGGCTACTGGAAACAATGCTTGTTATAGACAACGAAATA
TGTTATCGCGCGAAGGAATATCTTACAATCCACAAGCTATTTTCCACACGTGCTGATTTG
CATCGTACGGTCTATATGCATCCAAAAGTGAAGGCAATAGAGCTCATGGTTGTAGATGCC
TTGATAAAAGCCAATGACCATCTTCAAATTGCTTCGTACATAGACGAACCAGCTCAATAC
TGGATGTTAGATGATGCAATAGTCAAAACAATTGAAACTTCTACCGATCAAGAGCTAGAG
GAATCCAGAAATCTGATTCGTCGAATTCGGAGGAGGGATATATACCAGTTCTGTAATGAG
TTTGCTGTGCCCAAGGAGAAGCTGGAGCATTTCAAGAATGTGACGGCTCAAGATATAATT
TGTTCCCAGAATTCTGATGCTCATTTGAATGAGGAAGATGTCATTGTTACTAATGTTAAA
ATTGATTTGGCTAGTGGAAGGAATAATCCATTGGAAAGGATCAGCTTCTTCCAGGATTAT
GATAGCTTTGAGAAATTCCCTATAAAGGATGACCGCATCAGTCACTTGTTGCCTGCATGT
TACCAGGATATGATTGTTAGAGTTTATACCAGGAAATCTGAACTGGTAGAAGCTGTTTCT
GAAGCATTCGAGAATTTTCAGATGAAGACTTACGGGAAGAAAACACAAGTACATGCAACT
CCTGAAAAGAAGAAACGCCTGAAGTACTAG

Peptide Sequence

PEP ID

XP_016440624.1
PEP Infomation

PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Nicotiana tabacum]
Sequence

MGNCNNDDFWTYTSATSFVDDRRFSKHVHDNVHGNIYLDRLSLKFIDTEQFQRLRDLKQL
GLTYMVYPGAVHSRFEHSLGVYWLASDAVNRLKTCQGVELGIESFDVQTVKLAGLLHDVG
HGPFSHMFEREFLPRVRDGLKWSHEDMSLKMIDYIVDEHGIDIGSDCLKKVKELIVASEE
GNSVSSKEKQFLYDIVANGRNGIDVDKFDYIERDTRACGLGCNFQFQRLLETMLVIDNEI
CYRAKEYLTIHKLFSTRADLHRTVYMHPKVKAIELMVVDALIKANDHLQIASYIDEPAQY
WMLDDAIVKTIETSTDQELEESRNLIRRIRRRDIYQFCNEFAVPKEKLEHFKNVTAQDII
CSQNSDAHLNEEDVIVTNVKIDLASGRNNPLERISFFQDYDSFEKFPIKDDRISHLLPAC
YQDMIVRVYTRKSELVEAVSEAFENFQMKTYGKKTQVHATPEKKKRLKY

Transcript Sequence

Gene sequence data has not been registered.